Browse of TCMCG057C51796 protein

CDS

Accession Number	TCMCG057C51796
gbkey	CDS
Protein Id	XP_018457684.1
Location	join(35513526..35513883,35513966..35514066,35514156..35514212,35514309..35514403,35514508..35514607,35514750..35514808,35515083..35515207,35515407..35515464,35515661..35515748,35515829..35515907,35516030..35516081,35516173..35516248,35516317..35516427,35516517..35516612,35516883..35517005,35517125..35517322,35517406..35517510,35517596..35517660,35517734..35517827,35517925..35518082,35518164..35518213,35518288..35518409,35518548..35518655,35518756..35518848,35518946..35518982,35519063..35519313,35519386..35519535,35519683..35519844)
Gene	LOC108828474
GeneID	108828474
Organism	Raphanus sativus

Protein

Length	1056aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018602182.1
Definition	PREDICTED: NHL repeat-containing protein 2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Low-density lipoprotein-receptor YWTD domain
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009314        [VIEW IN EMBL-EBI] GO:0009416        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009532        [VIEW IN EMBL-EBI] GO:0009534        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009570        [VIEW IN EMBL-EBI] GO:0009579        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0010196        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0031976        [VIEW IN EMBL-EBI] GO:0031984        [VIEW IN EMBL-EBI] GO:0034357        [VIEW IN EMBL-EBI] GO:0042651        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044434        [VIEW IN EMBL-EBI] GO:0044435        [VIEW IN EMBL-EBI] GO:0044436        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:1990066        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCTTTGAAACTCTACTCCTCCTCACCTTCACTTTTCTTCCAATCATCAAGGAGATTCTCTTCTTCGATTAATCCAATTAGATCAAAACCCACGAAAAGATCATCATCTTCCTTTCCAGGATTCCGCTGTGTTTCTCCGCCTCCTTTACCGTCCTGGAAAGTGAGTGTTGCTGCGGAGAGCCCTCCGTCGACGACGGCAGAGGCGGATGATTGGGGGAAGGTATCCGCGGTGCTATTCGATATGGACGGTGTGCTTTGCAACAGCGAGGATCTCTCGAGACGAGCCGCAGTGGATGTCTTCACCGAGATGGGAGTTGAAGTCACCGTAGATGACTTCGTCCCTTTCATGGGAACAGGTGAAGCTAAGTTCTTAGGAGGTGTTGCTTCTGTGAAAGGAGTAAAAGAGTTTAATCCTGATGCAGCTAAAAAGCGCTTCTTTGAGATTTATCTCGATAAGTACGCGAAGCCAGAGTCTGGAATTGGATTTCCTGGAGCACTTGAGCTTGTTACTGAGTGTAAGAACAGAGGTCTCAAAGTCGCTGTTGCCTCTAGCGCCGACCGTGTCAAAGTTGATGCAAACCTTGCAGCCGCTGGTTTGTCTTTGTCCATGTTTGATGCAATTGTATCAGCAGACGCATTTGAGAACTTGAAACCAGCTCCAGATATTTTCTTGGCTGCTTCCAAGATCTTGGGTGTGCCCACAAGCGAGTGTATTGTTATTGAGGATGCACTTGCTGGAGTCCAGGCTGCTCAAGCTGCAAACATGAGATGCATAGCTGTGAAAACTACTTTATCTGAAGCAGTTCTTAAGGATGCTGGTCCGTCAATGATCCGAGACGATATCGGAAACATATCAATCAATGACATTCTCACTGGTGGCTCTGATTCTACCAGAAATCCAGGAAAAATACATCAAGAGAACACAGCCAGCGAAAAAAACAATAACAACGGGTTTCAGGGTTCTCGTCGAGATATACTGAGGTATGGGAGTCTTGGAATTGCTCTTTCTTGTGTCTACTTCGCCGCGAACAACTGGAAGGCAATGCAATATGCTTCTCCACAAGCTTTGTGGAACGCATTGGTTGGAACAAAAAGCCCTTCTTTTACACAGAACCAAGGTGAAGGGAGAGTCCAACAGTTCGTGGATTACATTGTCGATCTAGAGAGCAAGCAAACAGCTACAACTGTTCCAGAATTCCCATCTAAACTCGATTGGCTTAACACTGCCCCTCTCCAGTTTCGCCGGGATCTGAAAGGGAAAGTGGTGGTACTTGATTTTTGGACTTACTGCTGCATAAACTGTATGCATGTATTACCAGATCTTGAGTTTCTTGAGAAGAAGTATGCGGACAAGCCATTTACTGTTGTGGGTGTACACTCGGCTAAGTTCGACAACGAGAAGGACTTAGATGCCATACGAAATGCAGTCCTACGCTATGATATCAGTCACCCGGTTGTGAACGATGGAGACATGTACATGTGGAGAGAGCTGGGCATCAACTCGTGGCCTACATTTGCTGTTGTCTCACCAAATGGTAAAGTCATTGCACAGATTGCCGGAGAAAGTCACCGCAAAGATCTTGATGACTTGGTGGCAGCAGCTCTAATATACTATGGTGGGAAGAATGTTTTAGACAGCACTCCGCTTCCTACACGTTTGGAGAAAGATAATGATCCGCGCTTGGCCGCGTCTCCATTAAAATTCCCAGGGAAGCTGGCCATTGATACTCTTAACAACAGGCTGTTTATCTCAGACAGTAACCATAACCGCATTATCGTAACTGATCTTGACGGGAATTTCATCGGCCAAATCGGCAGTACCGGAGAAGAAGGCTTCCGTGATGGTTCCTTTGAAGATGCTGCATTCAATCGTCCTCAGGGACTTGCTTATAATGCAAAGAAGAATGTTCTTTATGTTGCTGATACCGAGAACCATGCTTTGAGGGTGATTGATTTTGTCAACGAGAGAGTGGAGACTCTGGCTGGTAATGGAACTAAAGGCTCAGATTACCAAGGTGGAAGAAAAGGAACCTCACAGCTTTTGAATTCTCCTTGGGATGTATGCTATGAGCCAGTGAAAGAGAAGGTCTACGTTGCAATGGCGGGTCAGCACCAGATTTGGGAATACAATGTGCTTGATGGTGTTACTAAAGTGTTCAGTGGGAATGGCTATGAAAGAAACCTTAATGGTTCTACCCCTCAAACGACATCGTTTGCTCAGCCTTCAGGAATCTCATTAGGCCCTGATTTGAAGGAAGCATATATTGCTGATAGCGAGAGCAGTTCTATTCGTGCCCTTGATCTTCAAACTGGAGCATCAAGATTGCTCGCTGGTGGTGATCCTTATTTCTCTGAGAATCTTTTCAAGTTTGGAGATAATGACGGTGTGGGAGCAGAAGTGCTCCTGCAACATCCACTTGGTGTGTTATGCGCAAAGGATGGCCAAATATATCTAGCTGATAGCTACAACCACAAGATTAAGAAGCTGGACCCTGTGACCAAACGTGTTGTTACTATCGCTGGGACAGGAAAAGCCGGTTTCAAAGATGGGAAGGTGATGGCTGCTCAGCTTTCAGAGCCTGCAGGACTTGCTCTAACTGAAAACGGGAGGCTTTTTGTTGCGGATACAAACAATAGTCTTATACGATACATAGATTTGAACAACAAAGAAGATGTAGAGATTCGTACACTGGAGTTAAAAGGCGTTCAACCGCCAATGCCAAAGGCAAAATCCTTGAAACGTTTGAGGAAACGTGCCTCGGCCGATACAAAGATTGTCACAGTGGATGCTGTTACATCTCGTGAAGGAGATTTGAATCTTAAAATCTCATTACCAGATGGCTACCATTTCTCCAAGGAAGCGCGGAGTAAGTTTGTGGTTGATGTTGAGCCTGAAGACGCAGTAACGGTCGAACCATTGGAAGGAATCCTTGGCCCTGAAGGTTCTACGGTGCTTCATTATAGACAATCTTCAACTTCTGCTTCTATTGGAAAAATCAGTTGCAAGGTGTACTATTGCAAAGAAGACGAGGTTTGCTTGTACCAGTCTGTTCAGTTTGAGGTACCTTTCAAGATGGAATCAGAATCATCTTCTTCTCACGTGATCGCATTCACCGTTAAACCTAGAGCATCAGATGCTGGCGGCTTAAAGCTTCAAGCTACTAGCTGA

Protein:   MALKLYSSSPSLFFQSSRRFSSSINPIRSKPTKRSSSSFPGFRCVSPPPLPSWKVSVAAESPPSTTAEADDWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFTEMGVEVTVDDFVPFMGTGEAKFLGGVASVKGVKEFNPDAAKKRFFEIYLDKYAKPESGIGFPGALELVTECKNRGLKVAVASSADRVKVDANLAAAGLSLSMFDAIVSADAFENLKPAPDIFLAASKILGVPTSECIVIEDALAGVQAAQAANMRCIAVKTTLSEAVLKDAGPSMIRDDIGNISINDILTGGSDSTRNPGKIHQENTASEKNNNNGFQGSRRDILRYGSLGIALSCVYFAANNWKAMQYASPQALWNALVGTKSPSFTQNQGEGRVQQFVDYIVDLESKQTATTVPEFPSKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYADKPFTVVGVHSAKFDNEKDLDAIRNAVLRYDISHPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGESHRKDLDDLVAAALIYYGGKNVLDSTPLPTRLEKDNDPRLAASPLKFPGKLAIDTLNNRLFISDSNHNRIIVTDLDGNFIGQIGSTGEEGFRDGSFEDAAFNRPQGLAYNAKKNVLYVADTENHALRVIDFVNERVETLAGNGTKGSDYQGGRKGTSQLLNSPWDVCYEPVKEKVYVAMAGQHQIWEYNVLDGVTKVFSGNGYERNLNGSTPQTTSFAQPSGISLGPDLKEAYIADSESSSIRALDLQTGASRLLAGGDPYFSENLFKFGDNDGVGAEVLLQHPLGVLCAKDGQIYLADSYNHKIKKLDPVTKRVVTIAGTGKAGFKDGKVMAAQLSEPAGLALTENGRLFVADTNNSLIRYIDLNNKEDVEIRTLELKGVQPPMPKAKSLKRLRKRASADTKIVTVDAVTSREGDLNLKISLPDGYHFSKEARSKFVVDVEPEDAVTVEPLEGILGPEGSTVLHYRQSSTSASIGKISCKVYYCKEDEVCLYQSVQFEVPFKMESESSSSHVIAFTVKPRASDAGGLKLQATS